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Friday, June 20, 2014
Physikron: Algorithms to boost shotgun coverage?
I have several sheets of paper on my desk listing things to tell you guys about from ASMS. This one is first because I got coffee on the sheet its on and I was afraid I wouldn't be able to read my notes later...
Physikron is a pre-processing program. Your RAW data goes to Physikron, it does proprietary magic and then you give the files to your search engine. Why on earth would you do this?
82% boost in proteins ID'ed?!?!?!?!
This is pretty unbelievable. In fact, I'd almost go right by this one. But it has papers backing it up. Now, I don't love giving my data to black box programs that are doing things I can't know about. At the end, however, if I get more high confidence protein IDs, I can get over it.
You can check out Physikron at the website here.
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