Thursday, May 9, 2013

Proteome Discoverer 1.4 Tutorial videos are now available


In partial explanation of why I haven't been writing very much, the complete series of Proteome Discoverer 1.4 videos are now up on planet orbitrap.  All of the videos are 5-15 minutes and directly address specific steps or processing methods
The list is as follows:


New in PD 1.4:  
FASTA databases:  
Configuring Mascot: 
Getting started with the PD 1.4 Daemon: 
Setting up/using spectral libraries:  
Setting up a simple workflow: 
False discovery (PSM validation) nodes: 
Workflow templates (exporting/importing): 
Using the annotator node:  
Running an iTRAQ/TMT experiment: 
Processing SILAC data: 
Label free quan experiments (PIAD):  
Processing neutral loss triggered MS2 LTQ data: 
Processing neutral loss triggered MS2 Q Exactive data:  
Exporting unmatched spectra for de novo or PTM analysis:  
Installing MSAmanda:  
Multi-enzyme processing in PD 1.4:  

www.planetorbitrap.com\libraries

Be sure to watch them in HD or they're hard to see.

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